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GENOTOXICITY OF NOT DIRECTLY DNA DAMAGING COMPOUNDS H. Stopper
Department of Toxicology, University of Würzburg, 97078 Würzburg, Germany
Address for correspondence:
Dr. Helga Stopper Department of Toxicology University of Würzburg Versbacher Str. 9
97078 Würzburg Germany Fax: (0)931-201-3446 E-mail:stopper@toxi.uni-wuerzburg.de
Keywords: Micronuclei, methylation, azacytidine, mutation, mitotic recombination
Download file as a Word document: Stopper.doc
Introduction
There are many compounds that induce genotoxic effects without directly damaging DNA.
Over the last years we have developed a working hypothesis to explain some of the
mechanisms involved (Fig. 1). An interaction of compounds with DNA in a not
directly damaging way can cause a change in DNA conformation. We hypothesize that the
interaction of proteins with such a DNA may be impaired as a consequence. If proteins of
the mitotic machinery are disturbed, micronuclei can be formed. Depending on the genes
encoded on the DNA enclosed in a micronucleus, its loss may result in the formation of
mutants. On the other side, most mutants are formed without micronucleus induction, for
example by loss of heterozygozity (LOH). Among the mechanisms leading to LOH, mitotic
recombination may be more important than previously assumed.
Genotoxicity of azacytidine-analogs
The cytidine-analog 5-azacytidine induces tumors in rodents (Carr et al. 1984; Schmahl
et al. 1985) and the mechanism of tumor induction is not clear. The compound does not
directly damage DNA.
We found that it induced micronuclei (Stopper et al. 1995b; Stopper et al. 1993b;
Stopper et al. 1992). Micronuclei in general can either contain a whole chromosome or a
chromosomal fragment. The first kind occurs if a chromosome is not at the right place in
mitosis or if chromosome distribution is not correct; these micronuclei usually appear
soon after substance treatment. The second kind requires chromosome breakage and usually
appears much later after treatment. Since 5-azacytidine-induced micronuclei appeared early
after treatment we investigated whether 5- azacytidine interferes with the arrangement of
chromosomes at mitosis (e.g. by spindle disturbance) and analyzed mitotic ring
arrangements (Stopper et al. 1993a). While the spindle disturbing compound
diethylstilbestrol (DES) increased the number of mitotic ring arrangements with displaced
chromosomes (example shown in Fig. 2) from 0 to 4.6%, 5-azacytidine did not induce
such misalignments.
Using a modified BrdU incorporation method, we then identified sensitive cell cycle
phases for micronucleus induction with 5- azacytidine (Stopper et al. 1993a). Syrian
hamster embryo fibroblasts that had been treated with 5-azacytidine and BrdU were analyzed
for micronucleus formation 12 hours after the end of the treatment. Only those cells that
had replicated DNA at the time of 5-azacytidine incubation could now have
antibody-detectable BrdU in their DNA. By analyzing the micronucleus containing cell
population we found that 5-azacytidine induced micronuclei only in cells that had
replicated DNA. Thus, it is very likely that 5- azacytidine can only induce micronuclei
after its incorporation into DNA. DES, which was included as a positive control for
spindle disturbance, was only active in those cells that had not replicated DNA during
substance exposure.
Further elucidation of the mechanism of 5-azacytidine-induced genotoxicity was
attempted by applying supravital UV-microscopy (Schiffmann and De Boni 1991; Stopper et
al. 1993a) (Fig. 3).
In this method, a cell culture is being seeded into gas-tight chambers, the DNA is
stained with low concentrations of bisbenzimid 33258, and the chamber is placed under a
fluorescent microscope. Neutral density filters are used to reduce the UV light to a level
that does not damage the cells within the observation time. The use of a
CCD-intensifier-camera and an image enhancement system (Hamamatsu Co., Herrsching/Germany)
permits the obervation of the live cells during the course of mitosis on a video monitor (Fig.
4). 5-Azacytidine treated cells entered mitosis normally and formed normal metaphase
arrangements. This was in agreement with the analysis of the metaphase arrangements in
fixed cells. However, chromatid separation at anaphase was disturbed and chromatin bridges
(thin threads of chromatin) were formed. When the daughter cells progressed into
interphase and moved apart from each other, these chromatin threads sometimes became very
thin and elongated. In some cases, the chromatin threads ruptured and micronuclei were
formed.
In our search for possible reasons for this chromosomal instability we questioned
whether
5-azacytidine-induced changes in the endogenous cytosine-methylation could be involved.
Normally, the pattern of cytosine-methylation in differentiated mammalian cells is stable
and heritable at cell division and cytosine- methylation is presumed to be involved in
many regulatory events like differentiation or neoplastic transformation of the cell
(Laird and Jaenisch 1996). 5-azacytidine cannot be methylated like cytidine and thus the
pattern and extent of cytosine-methylation is changed by 5-azacytidine incorporation into
DNA. We investigated 4 different analogs of cytosine that inhibit methylation to a
different degree (5-fluoro-2`-deoxyazacytidine; 5- azacytidine; 5,6-dihydroazacytidine;
6-azacytidine) (Stopper et al. 1995a). These analogs had been found to induce cell
differentiation (Jones and Taylor 1980) and to be mutagenic (McGregor et al. 1989) in the
same order of intensity as they inhibited methylation. We now found them to be cytotoxic
and to induce micronuclei in the same order of effectiveness, although 6- azacytidine,
which does not influence methylation, induced some micronuclei at high doses.
These findings lead us to the following hypothesis for the mechanisms of
5-azacytidine-mediated genotoxicity: A change in the pattern of methlyation can lead to a
change in DNA conformation. Changes in chromosome condensation have been described (Hori
1983; Schmid et al. 1984). The observed thin chromatin bridges in supravital UV-microscopy
can be interpreted as such a change in conformation. Furthermore, on a molecular level we
found a 10% change in curvature dependent gel mobility of a centromeric DNA fragment with
and without cytosine-methylation (S. Diekmann, unpublished results). Certain proteins may
be impaired in their interaction with DNA by this change in conformation. In the case of
the kinetochore complex this can lead to spindle-unattached chromosomes in metaphases or
to weakly attached chromosomes which are prone to malsegregation in mitosis. In fact, we
observed a lower percentage of kinetochore positive micronuclei (antibody staining; 19%)
than centromere positive (minor satellite in situ hybridization; 35%) in
5-azacytidine-induced micronuclei. In the case of topoisomerase II this impaired
interaction with DNA can result in difficulties in chromatid separation since the
chromosomes have not been dekatenated sufficiently when the cell attempts their separation
at anaphase (Downes et al. 1991) (Kirchner et al. 1995). We observed such anaphase
problems with supravital UV-microscopy experiments and we detected that the consequence
can be chromatid bridges and micronucleus formation.
To use another (possibly more physiological) way of hypomethylation, we investigated F9
mouse teratocarcinoma cells. These cells can be induced to differentiate in vitro over a
time period of 2 weeks (Alonso et al. 1991) and it has been shown that the pattern of
cytosine-methylation changes dramatically over that time (Razin et al. 1986). For example,
the minor satellite region which contains the kinetochore binding sequence (Masumoto et
al. 1989) and most likely many topoisomerase II binding regions (Sumner 1991), becomes
hypomethylated (Teubner and Schulz 1994). When we analyzed the frequency of spontaneously
occuring micronuclei during the time period of differentiation (Stopper et al. 1997c), we
found an increase. Kinetochore staining and in situ hybridization with a DNA probe that
binds to the minor satellite region revealed that the percentage of signal positive
micronuclei was increased in fully differentiated cells (time point 216 hours; 35.3/31.0%)
as compared to the time points before (up to 168 hours, less than 25.0/17.5%). A possible
interpretation would be that the kinetochore protein complex still bound to the DNA but
that its function was impaired, more chromosomes were not attached correctly to the
spindle and included in micronuclei as a consequence. Another explanation might be
increased tetraploidization as a result of impaired mitosis, and then increased genomic
instability of the tetroploid cells resulting in more micronuclei with whole chromosomes
included. Both explanations would be in aggreement with our working hypothesis.
To investigate the effects of methylation changes on topoisomerase II, we used a cell
free assay, in which the decatenation of mitochondrial DNA rings from Crithidia
fasciculata is measured (Marini et al. 1980). When we compared unmethylated catenated DNA
and CpG-methylated catenated DNA we found a marked difference in topoisomerase II activity
(results will be published separately).
In F9 cells, we measured topoisomerase II-mediated strand breaks in the comet assay in
dependence of the differentiation time. Although ethylmethane sulfonate induced comets at
all times, the topoisomerase II inhibitor etoposide only induced comets in
undifferentiated cells (Stopper et al. 1997c). Western blots (antibodies No.
680-topoisomerase II -N, No. 779-topoisomerase II- á-C; (Boege et al. 1995)) showed that
this was not due to a decrease in topoisomerase or á expression. Thus, the idea that
methylation changes influence the quality of DNA as a substrate for topoisomerase II was
further supported.
When we treated mouse lymphoma L5178Y cells with a sequential combination of
5-azacytidine and different topoisomerase II inhibitors, the increase in micronucleus
frequency was synergistic (over-addititve) (Stopper et al. 1997c). This would be in
accordance with the idea that both treatments, 5-azacytidine as well as the topoisomerase
II inhibitors, influence the same cellular target, namely topoisomerase II. In other
words, hypomethylation of the DNA inhibits topoisomerase II.
Thus, several lines of experimental evidence are all in accordance with our hypothesis
that changes in the pattern of endogenous cytosine-methylation can influence the
conformation of DNA and as a consequence impair the binding of DNA-interacting proteins
such as topoisomerase II and the kinetochore complex. This can lead to difficulties in
mitosis which can manifest as micronucleus formation. Other non-covalent interactions of
compounds with DNA, such as intercalation or binding to the minor groove may exert
comparable effects.
Fate of micronuclei
In the next step of our working hypothesis (Fig. 1)
we question the fate of micronucleus containing cells (Fig. 5) (Stopper et al. 1994).
The inclusion of a tumorsupressorgene in the micronucleus and the subsequent inactivation
or loss of that micronucleus could lead to a transformed cell and therefore be a step in
carcinogenesis. The death of a micronucleus containing cell would eliminate such a
potentially dangerous cell. Reintegration of micronuclear material into the main nucleus
might render the cells phenotypically normal. The situation for the growth of mutant
colonies in the L5178Y tk mutation assay depends on a comparable set of events. The
survival of trifluorthymidine-resistant mutant colonies in this cell line depends on the
loss of the thymidine- kinase (tk) gene. The tk gene is located on chromosome 11. Allele
11+ contains the active form and allele 11- contains an inactive form of the gene. Thus,
loss of chromosome 11 by micronucleus formation and inactivation/loss might be a mechanism
for the formation of mutant colonies in this cell system.
However, when we investigated induction of mutation by the four known aneugenic
compounds colcemid, diethylstilbestrol (DES), griseofulvin and vinblastine, we did not
find an increase in mutant frequency (Stopper et al. 1994). In a recent publication by
Sofuni et al. (Sofuni et al. 1996) several labs found DES and griseofulvin positive in the
same mutation assay system. However, DES was only positive after exogenous metabolic
activation, which may have lead to the loss of its aneugenic properties, and griseofulvin
was mutagenic under conditions of substance precipitation. Although we used a comparable
dose-range, microscopic inspection did not reveal any precipitation below 150 æg/ml.
Since no detailed description of experimental procedures is given by Sofuni et al., the
reason for the different precipitation behaviour is not known. However, the precipitated
compound may have exerted non-aneugenic effects. Under our treatment conditions we found
more than 87% of the induced micronuclei to be kinetochore positive, indicating
aneugenicity (Stopper et al. 1994).
The failure to induce mutation under our conditions allows at least 3 different
explanations. First, chromosome 11 was not included in micronuclei at sufficient
frequency. Second, the DNA in the micronuclei was reintegrated into the nuclear genome and
the cells resumed a non-mutant phenotype. Third, cells that have chromosome 11 included in
a micronucleus cannot survive to form mutant colonies. Whole chromosome in situ
hybridization ("chromosome painting") in micronuclei (Caspary et al. 1997)
showed that chromosome 11 was included at sufficient frequency that should have allowed
the detection of an elevated mutant frequency (Stopper et al. 1997b). Reintegration of
micronuclear material is theoretically possible, but would require the micronucleus to be
in cycle with the main nucleus to be successful; otherwise the result may be premature
chromosome condensation in the micronucleus and subsequent destruction of that DNA (Obe et
al. 1975). Furthermore, a large percentage of all micronuclei would have to be
reintegrated to explain the described findings. This explanation is thus considered
unlikely. Our own analyis of mutants and other published data never demonstrated a viable
L5178Y cell line that had lost chromosome 11+ completely without having reduplicated
chromosome 11-. Thus, we conclude that the most likely explanation is that chemically
induced loss of a whole chromosome in mouse lympoma L5178Y cells through micronucleus
formation leads to eventual cell death. The probability that primary human cells lose a
whole chromosome containing a tumorsuppressorgene through micronucleus formation and
survive to develop into a neoplastic cell is now also estimated to be very low. The
situation may be different at later stages of neoplastic development (e.g., in tumor
progession), where more unstable karyoptypes exist.
In the case of clastogenic compounds the loss of the material in micronuclei may not be
quite as detrimental to the cell and mutants might be formed through the hypothesized
pathway. However, comparison of micronucleus and mutant frequencies shows that other,
additional mechanisms for the induction of mutants must exist for not-directly genotoxic
compounds.
Mitotic recombination
Another mechanism of mutation that is mediated by the interaction between proteins and
DNA is mitotic recombination (Fig.6). These proteins might also be
influenced by the DNA secondary structure (conformation). By changing the DNA
conformation, not directly DNA damaging genotoxic compounds may alter the protein-DNA
interaction and the frequency of mitotic recombination might increase. To be able to
investigate that hypothesis in the L5178Y mouse lymphoma mutation assay system, a new
combination of a method for the detection of loss of heterozygozity with chromosome
specific in situ hybridization was required (Caspary et al. 1997; Liechty et al. 1995;
Liechty et al. 1997)). Short repetitive stretches of DNA composed of simple repeate
sequences are interspersed throughout the mammalian genomes and are called
microsatellites.
The length of these simple repeat sequences is often heterozygous between homologous
chromosomes (Fig. 7). After PCR-ampification, two DNA fragments with different
lengths occur. Loss of heterozygozity can be detected as the loss of one of the two
fragments. Mechanisms for LOH can be deletion, mitotic recombination, the loss of a whole
chromosome (e.g. by nondisjunction) with or without duplicaton of the other allele
(Caspary et al. 1997).

This type of analysis can determine the extent of LOH along the chromosome more exact
than other, previously available methods. A limitation of this method is that it is not
possible to identify the mechanisms leading to LOH. Specifically, translocations and
changes in chromosome number cannot be detected and mitotic recombination cannot be
clearly distinguished from deletion. To overcome these shortcomings, the results from
LOH-analysis can be combined with those from whole chromosome in situ hybridization.
Analysis of mutants
The advantages of the combination of these two techniques are best explained by the
following example (Fig. 8; Original examples see (Caspary et al. 1997)). Let us
assume that LOH-analysis of a mutant colony showed only one signal at all tested
microsatellites along chromosome 11. The first interpretation might have been that this
mutant had developed as a result of chromosome 11+ loss with or without duplication of the
other allele (11-). Another possibility would be mitotic recombination. Chromosome
painting then showed the presence of two chromosome 11 alleles.
Thus, chromosome loss without duplicaton could be ruled out. This cell system has an
additional feature that permits futher analysis. The centromeres of the two chromosome 11
alleles have different sizes and are not covered by in situ hybridization. Let us assume
that the size was different in our case. Then only one interpretation was possible. There
must have been mitotic recombination in which the former 11+ allele exchanged its material
between a breakpoint adjacent to the centromere and the distal end (including the tk gene)
with material from the 11- allele. Chromosome painting would also have revealed
translocations or chromosome number changes. When spontaneous mutants were investigated
(Liechty et al. 1997), it was found that about 30% showed a gene mutation and all others
(about 70%) showed LOH to some extend. About one third of these showed LOH almost along
the whole chromosome. Chromosome painting of these mutants is still in progress. However,
a vast majority of the analyzed mutants with larger LOH were due to mitotic recombinations
and not deletions or chromosome loss (W.J. Caspary, M.C. Liechty, and J.C. Hozier;
unpublished results).
We used the topoisomerase II inhibitor etoposide as a first model compound for the
analysis of mutants in this cell system with this combination of LOH-detection and
chromosome in situ hybridization ((Stopper et al. 1997a) ; original data will be published
separately). Etoposide induced a 10-fold increase in mutant frequency. From the mutants
that we have analyzed so far, less than 10% were due to point mutations and/or small
deletions (intragenic) mutation and more than 80% showed LOH to some extent. From those
showing LOH, about 20% were due to mitotic recombination. There was no chromosome loss
without reduplication of the other allele. Overall, the achievable percentage of mutations
that are due to large chromosomal changes is higher in this system which is heterozygous
for the selectable (tk) gene than in hemizygous (hprt) systems (McGregor et al. 1996). As
a conclusion, we consider mitotic recombination an important mechanism for mutant
induction. Mutant assay systems that are able to detect mitotic recombination should thus
be preferred in genotoxicity testing.
Acknowledgements
I would like to thank the many collaboration partners that contributed to various areas
of the results described here. Specifically, studies with the UV-microscopy technique and
several other micronucleus-experiments were a collaboration with Dr. D. Schiffmann
(Rostock, Germany); many of the methylation-related aspects were investigated together
with Dr. W.J. Caspary (NIEHS/NIH, RTP, USA); F9 mouse teratocarcinoma cell experiments
were a collaboration with Dr. W. Schulz (Düsseldorf, Germany). DNA curvature measurements
were performed by Prof. Dr. S. Diekman (Jena, Germany); the methods for mutant analysis
were developed by Liechty et al. (Liechty et al. 1997) and introduced to us by Dr. W.J.
Caspary. Members of my working group, that delivered the original data for the results
presented here, are Ms. I. Eckert, Dr. S. Kirchner, Mr. G. Boos, Mr. C. Korber and Ms. N.
Herrmann.
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