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Transposon Express |
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Transposon Express - Rapid analysis of mutagenesis data
This application was designed to assist with the Transposon Tn5062 high-throughput Streptomyces coelicolor mutagenesis programme developed at Swansea University. The software will load in a batch of sequence information files and process them sequentially, removing the transposon sequence. The processed files are then mapped to a position on a cosmid (from the cosmid library) and finally their genomic position recorded. Results are then annotated onto the ScoDB website. The application also offers a convenient organisation of files and experiments and ports data to a MySQL database, upon which other client applications can be written.
To dowload and install the program, please view the installation guide
The Transposon Express application downloads without the source code as default behaviour. However, if you'd like a copy of the source code you'll find it as a Winzipped archive on the source code download page
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Program and source
code developed and written by Gareth Hughes, 2003 - 2004 |
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